Newsletter - October 2022
nf-core community newsletter for October 2022
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5 pipeline releases, 8 upcoming events.
 1st October2022 |
Pipeline releases
Upcoming events
| Trainingnf-core Training - October 2022 | 3 Oct 2022 – 5 Oct 2022 |
| A set of global online Nextflow and nf-core training events | |
| HackathonHackathon - October 2022 (Barcelona) | 10 Oct 2022 – 12 Oct 2022 |
| A hybrid hackathon held in Barcelona and online | |
| TalkBytesize: nf-core/airrflow | 25 Oct 2022 |
| Gisela Gabernet, QBiC, University of Tübingen | |
| TalkBytesize: nf-core/nascent | 1 Nov 2022 |
| Edmund Miller - University of Texas at Dallas, USA | |
| TalkBytesize: Configuring lint tests | 8 Nov 2022 |
| Phil Ewels, Seqera labs | |
| TalkBytesize: using custom scripts in Nextflow pipelines | 15 Nov 2022 |
| Chris Hakkaart, Seqera labs | |
| TalkBytesize: Subworkflows | 22 Nov 2022 |
| Maxime Garcia, Seqera labs | |
| TalkBytesize: Working with GitHub using VSCode and Github CLI | 29 Nov 2022 |
| Phil Ewels, Seqera labs | |
In case you missed it
New pipelines & proposals
nf-core/fastquorumNew repo
Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)
Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)
nf-core/magmapNew repo
Best-practice analysis pipeline for mapping reads to a (large) collections of genomes
Best-practice analysis pipeline for mapping reads to a (large) collections of genomes
nf-core/pixelatorNew repo
Pipeline to generate Proximity Network Assay data with Pixelator (Pixelgen Technologies AB)
Pipeline to generate Proximity Network Assay data with Pixelator (Pixelgen Technologies AB)
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