15 pipeline releases, 7 upcoming events.

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1st April2023

New pipeline first releases! 🎉

These pipelines just had their very first release.

nf-core/taxprofilerv1.0.0
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
nf-core/viralintegrationv0.1.0
Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.

Pipeline releases

nf-core/airrflow
v3.020 Mar 2023
nf-core/ampliseq
v2.5.02 Mar 2023
nf-core/circdna
v1.0.29 Mar 2023
nf-core/cutandrun
v3.110 Mar 2023
nf-core/epitopeprediction
v2.2.0v2.2.117 Mar 2023
nf-core/isoseq
v1.1.3v1.1.413 Mar 2023
nf-core/mag
v2.3.02 Mar 2023
nf-core/nanoseq
v3.1.010 Mar 2023
nf-core/rnafusion
v2.2.013 Mar 2023
nf-core/rnaseq
v3.11.0v3.11.131 Mar 2023
nf-core/scrnaseq
v2.2.020 Mar 2023
nf-core/viralrecon
v2.6.023 Mar 2023

Upcoming events

TalkBytesize: HackMD and reveal.js18 Apr 2023
Maxime Garcia, Seqera Labs
TalkBytesize: training translations25 Apr 2023
Marcel Ribeiro-Dantas, Seqera Labs
TalkBytesize: Converting Python scripts into packages for PyPI, Bioconda & Biocontainers2 May 2023
Phil Ewels - Seqera Labs
TalkBytesize: Experiences in the nf-core Mentoring Program9 May 2023
Mariana Guilardi (Federal University of Sao Paulo, UNIFESP) and Alyssa Briggs (The University of Texas at Dallas)
TalkBytesize: nf-core community survey 202316 May 2023
Christopher Hakkaart - Seqera Labs
TalkBytesize: Workflow safety and immutable objects23 May 2023
Rob Syme, Seqera Labs
TalkBytesize: nf-core/quantms30 May 2023
Julianus Pfeuffer (Zuse Institute Berlin) and Yasset Perez Riverol (EMBL-EBI)

In case you missed it

nf-core Training - March 2023
13 Mar 2023 – 16 Mar 2023Training
Hackathon - March 2023 (Online)
27 Mar 2023 – 29 Mar 2023Hackathon

New pipelines & proposals

nf-core/spinningjennyNew repo
Pipeline for simulating the first industrial revolution using Agent Based Models.

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