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5 pipeline releases, 12 upcoming events.

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1st September2023

New pipeline first releases! 🎉

These pipelines just had their very first release.

nf-core/pangenomev1.0.0
Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.

Pipeline releases

nf-core/atacseq
v2.1.27 Aug 2023
nf-core/cutandrun
v3.231 Aug 2023
nf-core/funcscan
v1.1.311 Aug 2023
nf-core/scrnaseq
v2.4.024 Aug 2023

Upcoming events

TalkBytesize: Setting up a gitpod environment5 Sept 2023
Marcel Ribeiro-Dantas, Seqera Labs
TrainingCommunity Foundational Nextflow Training - September 20236 Sept 2023 – 8 Sept 2023
The primary Nextflow / nf-core training for beginners, with 3 x 2.5 hour sessions.
TalkBytesize: A beginners guide to nf-core12 Sept 2023
Franziska Bonath, National Genomics Infrastructure, Stockholm
TalkBytesize: Using Wave Containers19 Sept 2023
Marcel Ribeiro-Dantas, Seqera Labs
TrainingHands-on Nextflow Training - September 202320 Sept 2023
A fast way to get up and running with Nextflow - hands on and light on theory. One 2 hour session.
TrainingCommunity Advanced Nextflow Training - September 202327 Sept 2023 – 28 Sept 2023
Join us for the first ever Advanced community training! Become a Nextflow expert!
TalkBytesize: The new nf-core website3 Oct 2023
Matthias Hörtenhuber, Scilifelab Data Center
TalkBytesize: Using nf-core configs in custom pipelines10 Oct 2023
Judith Ballesteros, Max Planck Institute for evolutionary anthropology
TalkNextflow in Action12 Oct 2023
Tree of Life, Wellcome Sanger Institute and Genomics England
HackathonHackathon - October 2023 (Barcelona)16 Oct 2023 – 18 Oct 2023
A hybrid hackathon held in Barcelona and online
TalkBytesize: nf-core/viralintegration24 Oct 2023
Alyssa Briggs, The University of Texas at Dallas
TalkBytesize: Converting pytest modules to nf-test31 Oct 2023
Adam Talbot (Seqera) and Sateesh Peri (MemVerge)

New pipelines & proposals

nf-core/diseasemodulediscoveryNew repo
A pipeline for network-based disease module identification.
nf-core/drugresponseevalNew repo
Pipeline for testing drug response prediction models in a statistically and biologically sound way.

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