7 pipeline releases, 9 upcoming events.

View in browser

nf-core newsletter logo

1st October2023

Pipeline releases

nf-core/isoseq
v1.1.54 Sept 2023
nf-core/mag
v2.4.026 Sept 2023
nf-core/nanostring
v1.2.04 Sept 2023
nf-core/rnafusion
v2.4.025 Sept 2023
nf-core/sarek
v3.3.0v3.3.118 Sept 2023
nf-core/smrnaseq
v2.2.2v2.2.36 Sept 2023
nf-core/taxprofiler
v1.1.019 Sept 2023

Upcoming events

TalkBytesize: The new nf-core website3 Oct 2023
Matthias Hörtenhuber, Scilifelab Data Center
TalkBytesize: Using nf-core configs in custom pipelines10 Oct 2023
Judith Ballesteros, Max Planck Institute for evolutionary anthropology
TalkNextflow in Action12 Oct 2023
Tree of Life, Wellcome Sanger Institute and Genomics England
HackathonHackathon - October 2023 (Barcelona)16 Oct 2023 – 18 Oct 2023
A hybrid hackathon held in Barcelona and online
TalkBytesize: nf-core/viralintegration24 Oct 2023
Alyssa Briggs, The University of Texas at Dallas
TalkBytesize: Converting pytest modules to nf-test31 Oct 2023
Adam Talbot (Seqera) and Sateesh Peri (MemVerge)
TalkBytesize: nf-core/pangenome7 Nov 2023
Simon Heumos, QBiC, University of Tübingen
TalkBytesize: The Art of a Minimal Example14 Nov 2023
Phil Ewels (Seqera)
HackathonHackathon - November 2023 (Boston)28 Nov 2023 – 29 Nov 2023
An in-person hackathon held in Boston

In case you missed it

Community Advanced Nextflow Training - September 2023
27 Sept 2023 – 28 Sept 2023Training

New pipelines & proposals

nf-core/readsimulatorNew repo
A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.

This newsletter is brought to you by the nf-core community. Unsubscribe here .

Join us ·Blog ·Events ·GitHub