2 blog posts, 15 pipeline releases, 7 upcoming events.

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1st March2025

Blog posts

Maintainers Minutes: February 2025
Keeping you informed of the latest maintainers discussions
28 Feb 2025 · by jfy133
Cartoon yellow rubber duck with nf-core logo badge on its body with the nf-core logo.
Integrating ontologies into nf-core modules
Getting onto the right path
24 Feb 2025 · by mirpedrol, mashehu
A path made out of wooden planks in the middle of a green forest.

New pipeline first releases! 🎉

These pipelines just had their very first release.

nf-core/fastqrepairv1.0.0
A pipeline that can be used to recover corrupted FASTQ.gz files, drop or fix uncompliant reads, remove unpaired reads, and settles reads that became disordered
nf-core/pacvarvv1.0.0
Longread PacBio sequencing processing for WGS and PureTarget
nf-core/proteinfamiliesv1.0.0
Generation and updating of protein families
nf-core/variantbenchmarkingv1.0.0
Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research

Pipeline releases

nf-core/demultiplex
v1.6.019 Feb 2025
nf-core/mag
v3.3.113 Feb 2025
nf-core/metatdenovo
v1.1.026 Feb 2025
nf-core/pairgenomealign
v2.0.05 Feb 2025
nf-core/pangenome
v1.1.39 Feb 2025
nf-core/phyloplace
v2.0.021 Feb 2025
nf-core/raredisease
v2.3.0v2.4.024 Feb 2025
nf-core/riboseq
v1.1.03 Feb 2025
nf-core/sarek
v3.5.118 Feb 2025
nf-core/viralmetagenome
v0.1.228 Feb 2025

Upcoming events

TalkBytesize: nf-core/multiplesequencealign4 Mar 2025
Luisa Santus, PhD candidate at the Centre for Genomic Regulation (CRG)
TrainingNextflow Training Week - March 202510 Mar 2025 – 14 Mar 2025
Join the new `Hello Nextflow` training and more online
Talk#animal-genomics: March Meeting19 Mar 2025
Christopher Tuggle (Iowa State University, USA)
HackathonHackathon - March 2025 (Online / Distributed)24 Mar 2025 – 26 Mar 2025
A virtual hackathon with local sites to develop nf-core together
TalkBytesize: nf-core/variantbenchmarking1 Apr 2025
Kübra Narci, German Human Genome-Penome Archieve, DKFZ Heidelberg
TalkBytesize: nf-core/proteinfamilies8 Apr 2025
Evangelos Karatzas, EMBL-EBI, Cambridge
Talk#animal-genomics: April Meeting16 Apr 2025
Damir Baranasic (MRC, London Institute of Medical Sciences, UK)

In case you missed it

New pipelines & proposals

nf-core/mitodetectNew repo
A-Z analysis of mitochondrial NGS data
nf-core/ribomsqcNew repo
QC pipeline that monitors mass spectrometer performance in ribonucleoside analysis
nf-core/sopaNew repo
Nextflow version of Sopa - spatial omics pipeline and analysis

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