Want nf-core news in your inbox? Subscribe to the newsletter.

4 blog posts, 9 pipeline releases, 6 upcoming events.

View in browser

nf-core newsletter logo

1st September2025

Blog posts

Maintainers Minutes: August 2025
Keeping you informed of the latest maintainers discussions
31 Aug 2025 · by maxulysse
Cartoon yellow rubber duck with nf-core logo badge on its body with the nf-core logo.
Why are my pipeline download tests failing?
Refurbishing the pipeline downloads command
28 Aug 2025 · by ErikDanielsson, mirpedrol, MatthiasZepper
Short range photograph of a truck transporting large green pipes.
Introducing nf-core Advisories
Timely technical issue alerts, no matter how remote you are.
21 Aug 2025 · by MatthiasZepper
A cartoon penguin standing on snow looks startled as it approaches a wooden signpost with three directional signs. The top sign, pointing right and colored light blue, reads 'Known Regression' with a bug icon. The middle sign, pointing left and colored dark blue, reads 'Data Corruption' with a database icon. The bottom sign, pointing right and colored yellow, reads 'Incompatibility' with a warning triangle. The background shows an icy, snowy landscape under a blue sky with soft clouds.
Empowering bioinformatics communities with Nextflow and nf-core
Next nf-core scientific article now published in Genome Biology!
6 Aug 2025 · by maxulysse, jfy133, JoseEspinosa, mashehu, christopher-hakkaart
Laboratory glassware — beakers, a conical flask and a pipette on a lab bench

Pipeline releases

nf-core/denovotranscript
v1.2.128 Aug 2025
nf-core/detaxizer
v1.2.07 Aug 2025
nf-core/metatdenovo
v1.3.029 Aug 2025
nf-core/methylseq
v4.1.010 Aug 2025
nf-core/pairgenomealign
v2.2.118 Aug 2025
nf-core/proteinfamilies
v1.3.06 Aug 2025
nf-core/rnaseq
v3.20.018 Aug 2025
nf-core/rnavar
v1.1.1v1.2.027 Aug 2025
nf-core/taxprofiler
v1.2.428 Aug 2025

Upcoming events

TalkBytesize: nf-core/createtaxdb9 Sept 2025
James Fellows Yates, Leibniz-HKI
TalkBytesize: RFCs16 Sept 2025
Phil Ewels, Seqera
Talk#animal-genomics: September Meeting17 Sept 2025
Brenda Murdoch & Temitayo Olangunju (University of Idaho, USA)
Talk#animal-genomics: October Meeting15 Oct 2025
Daniela Lourenco (University of Georgia, USA)
HackathonHackathon - October 2025 (Barcelona)28 Oct 2025 – 29 Oct 2025
An in-person hackathon held in Barcelona
TalkBytesize: nf-core/mag v5.028 Oct 2025
Diego Alvarez Saravia, University of Magallanes

In case you missed it

New pipelines & proposals

Proposals from nf-core/proposals.

nf-core/funcprofilerNew repo
Read-based functional profiling of microbiome sequencing data
nf-core/chemclipAccepted
Pipeline proposal #67
microfunctprofilerAccepted
Pipeline proposal #59
nf-core/nf-segmentedNew
Pipeline proposal #74
nf-core/thetisNew
Pipeline proposal #66
nf-core/crispressoNew
Other proposal #75
Make QC steps opt-inNew
Other proposal #71

This newsletter is brought to you by the nf-core community.

Join us ·Blog ·Events ·GitHub